MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Bacteroides acidifaciens 19428wH3_P2318

Change genome:

from a total of 52 genomes

Available tools:

Quick search:

(leave empty to show all)

PROKKA Genome Annotation:

contigs: 233

bases: 5,137,552 bps

CDS: 4,380

rRNA: 8

Repeat region:

tmRNA: 1

tRNA: 70

misc RNA:

Total features: 4,459

Total number of protein coding genes annotated/found: 4,380

Display 20 50 100 All items per page

Items 1 - 20

🡆

click arrow to navigate by page or

of 220 pages

Molecule	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range ^	Gene Product Name
SEQF5013\|JADGKQ010000110.1	SEQF5013_00131	NA AA	993/331	1396-404	hypothetical protein
SEQF5013\|JADGKQ010000110.1	SEQF5013_00132	NA AA	609/203	2034-1426	Holliday junction ATP-dependent DNA helicase RuvA
SEQF5013\|JADGKQ010000110.1	SEQF5013_00133	NA AA	900/300	2326-3225	Meso-diaminopimelate D-dehydrogenase
SEQF5013\|JADGKQ010000110.1	SEQF5013_00134	NA AA	924/308	3312-4235	hypothetical protein
SEQF5013\|JADGKQ010000085.1	SEQF5013_04118	NA AA	894/298	1226-333	4-hydroxy-tetrahydrodipicolinate synthase
SEQF5013\|JADGKQ010000085.1	SEQF5013_04119	NA AA	2001/667	3286-1286	DNA ligase
SEQF5013\|JADGKQ010000085.1	SEQF5013_04120	NA AA	678/226	3361-4038	tRNA (guanine-N(1)-)-methyltransferase
SEQF5013\|JADGKQ010000085.1	SEQF5013_04121	NA AA	912/304	5186-4275	Dihydroorotate dehydrogenase B (NAD(+))%2C catalytic subunit
SEQF5013\|JADGKQ010000085.1	SEQF5013_04122	NA AA	855/285	6028-5174	Dihydroorotate dehydrogenase B (NAD(+))%2C electron transfer subunit
SEQF5013\|JADGKQ010000085.1	SEQF5013_04123	NA AA	447/149	6475-6029	hypothetical protein
SEQF5013\|JADGKQ010000085.1	SEQF5013_04124	NA AA	1020/340	8741-7722	putative protein YqeN
SEQF5013\|JADGKQ010000085.1	SEQF5013_04125	NA AA	777/259	9538-8762	AMP nucleosidase
SEQF5013\|JADGKQ010000085.1	SEQF5013_04126	NA AA	450/150	9601-10050	hypothetical protein
SEQF5013\|JADGKQ010000085.1	SEQF5013_04127	NA AA	831/277	11128-10298	hypothetical protein
SEQF5013\|JADGKQ010000085.1	SEQF5013_04128	NA AA	1095/365	12228-11134	GTP cyclohydrolase 1 type 2
SEQF5013\|JADGKQ010000085.1	SEQF5013_04129	NA AA	414/138	12337-12750	hypothetical protein
SEQF5013\|JADGKQ010000100.1	SEQF5013_00001	NA AA	456/152	1764-1309	hypothetical protein
SEQF5013\|JADGKQ010000100.1	SEQF5013_00004	NA AA	1638/546	2351-3988	hypothetical protein
SEQF5013\|JADGKQ010000100.1	SEQF5013_00005	NA AA	807/269	4879-4073	hypothetical protein
SEQF5013\|JADGKQ010000100.1	SEQF5013_00006	NA AA	369/123	5261-4893	hypothetical protein

Items 1 - 20

🡆

click arrow to navigate by page or

of 220 pages

JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting

Page last updated: July 7, 2021 08:39:35